9S35 image
Deposition Date 2025-07-23
Release Date 2025-09-03
Last Version Date 2025-09-03
Entry Detail
PDB ID:
9S35
Title:
Cryo-EM structure of Candida albicans Vrg4 bound to an inhibitory nanobody.
Biological Source:
Source Organism:
Lama glama (Taxon ID: 9844)
Candida albicans (Taxon ID: 5476)
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:GDP-mannose transporter
Gene (Uniprot):VRG4
Chain IDs:B (auth: A)
Chain Length:338
Number of Molecules:1
Biological Source:Candida albicans
Polymer Type:polypeptide(L)
Molecule:Llama Nanobody
Chain IDs:A (auth: B)
Chain Length:123
Number of Molecules:1
Biological Source:Lama glama
Primary Citation
Structural basis for transport and inhibition of nucleotide sugar transport in pathogenic fungi.
Res Sq ? ? ? (2025)
PMID: 40799752 DOI: 10.21203/rs.3.rs-7213965/v1

Abstact

GDP-Mannose transporters are Golgi-localised solute carriers that are essential for the virulence of pathogenic fungi, serving as critical components of fungal glycosylation pathways. However, the mechanism by which nucleotide sugars are recognised and transported across the Golgi membrane remains unclear, hindering efforts to develop effective inhibitors that could serve as novel antifungal agents. Here, we present cryo-EM structures of the GDP-Mannose transporter, Vrg4, from Candida albicans in complex with nanobodies and in both the cytoplasmic and Golgi-facing states. Structural comparisons between these two states, in addition to a GDP-mannose bound structure, demonstrate the importance of ligand movement during transport. Additionally, we demonstrate the ability of the nanobodies to specifically inhibit Vrg4, presenting proof-of-principle that nanobodies can be used as effective inhibitors of nucleotide sugar transport and glycosylation in cells.

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