9RXI image
Deposition Date 2025-07-11
Release Date 2026-01-28
Last Version Date 2026-01-28
Entry Detail
PDB ID:
9RXI
Keywords:
HYDROLASE
Title:
Schistosoma mansoni Cathepsin D1 bound to Nb10C9
Biological Source:
Source Organism(s):
Schistosoma mansoni (Taxon ID: 6183)
Lama glama (Taxon ID: 9844)
Expression System(s):
Homo sapiens, Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.59 Å
R-Value Free:
0.23
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
9RXI validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cathepsin D (A01 family)
Chain IDs:A, B, C, D
Chain Length:381
Number of Molecules:4
Biological Source:Schistosoma mansoni
UniProt ID:G4VEV6 Pfam ID:PF07966, PF00026
Polymer Type:polypeptide(L)
Molecule:Nb_10C9
Chain IDs:E (auth: H), F (auth: E)
Chain Length:152
Number of Molecules:2
Biological Source:Lama glama
Ligand Molecules
CA
NA
Primary Citation
Crystal structure of Schistosoma mansoni Cathepsin D1 in complex with a nanobody reveals the conformation of the propeptide bound state
Acta Crystallogr.,Sect.D ? ? ? (2026)
Primary Citation of related structures
9RXI
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