ISDA: 9RMX

Deposition Date 2025-06-19

Release Date 2025-12-10

Last Version Date 2026-03-04

Entry Detail

PDB ID:

9RMX

Keywords:

VIRAL PROTEIN

Title:

CryoEM reconstruction of integrase filament at the lumen of native HIV-1 cores (box size 34.2 nm)

Biological Source:

Source Organism(s):

Human immunodeficiency virus 1 (Taxon ID: 11676)

Expression System(s):

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.63 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Integrase
Gene (Uniprot):gag-pol
Mutagens:D64N, D116N
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:288
Number of Molecules:12
Biological Source:Human immunodeficiency virus 1

UniProt ID:P12497 Pfam ID:PF02022, PF00665, PF00552

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Gag polyprotein
Gene (Uniprot):gag
Chain IDs:M (auth: U), N (auth: V), O (auth: W), P (auth: X), Q (auth: Y), R (auth: Z), S (auth: a), T (auth: b), U (auth: c), V (auth: d), W (auth: e), X (auth: f), Y (auth: g), Z (auth: h), AA (auth: i), BA (auth: j), CA (auth: k), DA (auth: l), EA (auth: m), FA (auth: n), GA (auth: o), HA (auth: p), IA (auth: q), JA (auth: r), KA (auth: s), LA (auth: t), MA (auth: u), NA (auth: v), OA (auth: w), PA (auth: x), QA (auth: y), RA (auth: z)
Chain Length:288
Number of Molecules:32
Biological Source:Human immunodeficiency virus 1

UniProt ID:Q72497 Pfam ID:PF00607, PF19317

Ligand Molecules