9RM2 image
Deposition Date 2025-06-17
Release Date 2025-07-09
Last Version Date 2025-07-30
Entry Detail
PDB ID:
9RM2
Keywords:
Title:
BKPyV VP1 IN COMPLEX WITH 319C07-FAB
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.96 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:319C07 antibody heavy chain, Fab fragment
Chain IDs:A (auth: H), D (auth: A), G (auth: D), J (auth: G), M
Chain Length:223
Number of Molecules:5
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:319C07 antibody light chain, Fab fragment
Chain IDs:B (auth: L), E (auth: B), H (auth: E), K (auth: J), N
Chain Length:215
Number of Molecules:5
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Major capsid protein VP1
Mutagens:C105S
Chain IDs:C (auth: P), F (auth: C), I (auth: F), L (auth: K), O
Chain Length:300
Number of Molecules:5
Biological Source:Betapolyomavirus hominis
Primary Citation
A highly potent human antibody neutralizing all serotypes of BK polyomavirus.
Plos Pathog. 21 e1013122 e1013122 (2025)
PMID: 40680077 DOI: 10.1371/journal.ppat.1013122

Abstact

BK polyomavirus infection poses a significant risk to kidney transplant recipients. Reactivation of dormant virus in the transplanted kidney, triggered by immunosuppression, can lead to BK polyomavirus-associated nephropathy in up to 10% of transplants, often resulting in loss of graft function or even graft loss. Currently, there is no specific treatment that reliably prevents BK polyomavirus-associated nephropathy or halts its progression. Standard of care relies on reducing immunosuppression, allowing the immune system to gradually control the infection but at the risk of provoking rejection episodes and compromising kidney function. This study describes the discovery and characterization of a highly-potent BK polyomavirus-neutralizing antibody, identified from a kidney transplant recipient who displayed rapid clearance of high-level BKPyV-DNAemia. Antibody mAb 319C07 (USAN potravitug) neutralizes all four BK polyomavirus serotypes and recognizes an epitope critical for viral cell attachment. mAb 319C07 is in clinical development for the treatment of BKPyV infection in renal transplant patients (NCT05769582).

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Primary Citation of related structures