ISDA: 9RKU

Deposition Date 2025-06-14

Release Date 2025-12-10

Last Version Date 2025-12-10

Entry Detail

PDB ID:

9RKU

Keywords:

VIRUS

Title:

Agrobacterium phage 7-7-1 baseplate

Biological Source:

Source Organism:

Agrobacterium phage 7-7-1 (Taxon ID: 1161931)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.44 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative tail biosynthetic protein
Gene (Uniprot):7-7-1_0003
Chain IDs:Y (auth: A1), Z (auth: A2), AA (auth: A3), BA (auth: A4), CA (auth: A5), DA (auth: A6)
Chain Length:398
Number of Molecules:6
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7FAD8 Pfam ID:PF07157

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative structural protein
Gene (Uniprot):7-7-1_0006
Chain IDs:EA (auth: A7), FA (auth: A8), GA (auth: A9), HA (auth: A0), IA (auth: BA), JA (auth: BB)
Chain Length:178
Number of Molecules:6
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7FA56 Pfam ID:PF07409

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Baseplate protein
Gene (Uniprot):7-7-1_0005
Chain IDs:A (auth: Ac), B (auth: Ad), C (auth: Ae)
Chain Length:189
Number of Molecules:3
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7FAQ1

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative tail biosynthetic protein
Gene (Uniprot):7-7-1_0004
Chain IDs:D (auth: Af), E (auth: Ag), F (auth: Ah)
Chain Length:454
Number of Molecules:3
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7F9D2

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Structural protein
Gene (Uniprot):7-7-1_0008
Chain IDs:G (auth: Ai), H (auth: Aj), I (auth: Ak), J (auth: Al), K (auth: Am), L (auth: An)
Chain Length:286
Number of Molecules:6
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7FAD9

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Baseplate protein
Gene (Uniprot):7-7-1_0007
Chain IDs:M (auth: Ao), N (auth: Ap), O (auth: Aq), P (auth: Ar), Q (auth: As), R (auth: At), S (auth: Au), T (auth: Av), U (auth: Aw), V (auth: Ax), W (auth: Ay), X (auth: Az)
Chain Length:396
Number of Molecules:12
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7F8X4 Pfam ID:PF04865

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Tail sheath protein
Gene (Uniprot):7-7-1_000126
Chain IDs:KA (auth: BN), MA (auth: BC), OA (auth: BD), QA (auth: BE), SA (auth: BF), UA (auth: BG), WA (auth: BH), YA (auth: BI), AB (auth: BJ), CB (auth: BK), EB (auth: BL), GB (auth: BM)
Chain Length:503
Number of Molecules:12
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7FA80

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Structural protein
Gene (Uniprot):7-7-1_000127
Chain IDs:LA (auth: BO), NA (auth: BP), PA (auth: BQ), RA (auth: BR), TA (auth: BS), VA (auth: BT), XA (auth: BU), ZA (auth: BV), BB (auth: BW), DB (auth: BX), FB (auth: BY), HB (auth: BZ)
Chain Length:136
Number of Molecules:12
Biological Source:Agrobacterium phage 7-7-1

UniProt ID:J7F8Z8

Ligand Molecules

Primary Citation

Using cryogenic electron micrography methods to gain insight into structure and initial host attachment of the fagellotrophic bacteriophage 7-7-1

Noteborn, W.E.M, Hoeksma, T, Briegel, A.Show

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