9R45 image
Deposition Date 2025-05-07
Release Date 2025-12-03
Last Version Date 2025-12-03
Entry Detail
PDB ID:
9R45
Keywords:
Title:
Spitrobot-2 advances time-resolvedcryo-trapping crystallography to under 25 ms: Xylose isomerase (apo state)
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.79 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 2 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Xylose isomerase
Gene (Uniprot):xylA
Chain IDs:A
Chain Length:388
Number of Molecules:1
Biological Source:Streptomyces rubiginosus
Ligand Molecules
Primary Citation
Spitrobot-2 advances time-resolved cryo-trapping crystallography to under 25 ms.
Commun Chem 8 363 363 (2025)
PMID: 41266557 DOI: 10.1038/s42004-025-01784-9

Abstact

We previously introduced the spitrobot, a protein crystal plunging system that enables reaction quenching via cryo-trapping with a time resolution in the millisecond range. Here we present the next generation, spitrobot-2, as an integrated benchtop device. User-friendliness has been improved by semi-automatic sample exchange. Moreover, a fully automated shutter shields the liquid nitrogen from the humidified environment, improving sample integrity. Most importantly, the cryo-trapping delay time has been reduced to 23 ms, making spitrobot-2 twice as fast as the previous generation. This further expands the number of target systems that can be addressed by cryo-trapping time-resolved crystallography. Using 12 crystal structures of three independent model systems, we demonstrate successful cryo-trapping via observation of conformational changes and ligand binding within 25 ms. These improvements increase the convenient access to cryo-trapping, time-resolved X-ray crystallography empowering the MX community with efficient tools to advance research in structural biology.

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Primary Citation of related structures
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