9QMP image
Entry Detail
PDB ID:
9QMP
Keywords:
Title:
E.coli seryl-tRNA synthetase
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2025-03-24
Release Date:
2025-05-14
Method Details:
Experimental Method:
Resolution:
2.48 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Serine--tRNA ligase
Chain IDs:A
Chain Length:430
Number of Molecules:1
Biological Source:Escherichia coli K-12
Primary Citation

Abstact

The three-dimensional crystal structure of seryl-transfer RNA synthetase from Escherichia coli, refined at 2.5 A resolution, is described. It has an N-terminal domain that forms an antiparallel alpha helical coiled-coil, stretching 60 A out into the solvent and stabilized by interhelical hydrophobic interactions and an active-site alpha-beta domain based around a seven-stranded antiparallel beta sheet. Unlike the three other known synthetase structures, the enzyme contains no classical nucleotide-binding fold, and is the first representative of a second class of aminoacyl-tRNA synthetase structures.

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Primary Citation of related structures