9QE1 image
Deposition Date 2025-03-07
Release Date 2025-06-25
Last Version Date 2025-09-17
Entry Detail
PDB ID:
9QE1
Title:
Neobacillus vireti Wadjet-II JetABC monomer
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:JetC
Chain IDs:A, B
Chain Length:1371
Number of Molecules:2
Biological Source:Neobacillus vireti LMG 21834
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:JetB
Chain IDs:C (auth: D)
Chain Length:389
Number of Molecules:1
Biological Source:Neobacillus vireti LMG 21834
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:JetA
Chain IDs:D (auth: E), E (auth: J)
Chain Length:500
Number of Molecules:2
Biological Source:Neobacillus vireti LMG 21834
Ligand Molecules
Primary Citation
Structure of a type II SMC Wadjet complex from Neobacillus vireti.
Structure 33 1498 ? (2025)
PMID: 40628265 DOI: 10.1016/j.str.2025.06.004

Abstact

Structural maintenance of chromosome complexes are essential DNA-folding motors that facilitate critical cellular functions, including chromosome segregation and DNA repair. Wadjet systems are prokaryotic SMC complexes specialized in cellular immunity against plasmids. Type I Wadjet systems restrict plasmids via a DNA extrusion-cleavage reaction. Two other Wadjet types (II and III) have also been identified, however, their molecular characteristics are unclear. Here, we reconstituted a representative type II Wadjet system from Neobacillus vireti. We show that this system shares substrate selection and cleavage properties with type I but exhibits distinctive structural features, including a long elbow-distal coiled coil, a channel-less hinge, and a tandem KITE subunit. These features help identify the common and distinguishing architectural elements in the family of Wadjet systems and raise intriguing questions about the evolution of prokaryotic SMC complexes.

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Primary Citation of related structures