9QCD image
Deposition Date 2025-03-04
Release Date 2025-12-31
Last Version Date 2025-12-31
Entry Detail
PDB ID:
9QCD
Keywords:
SIGNALING PROTEIN
Title:
Micro-ED structure of the NSH2-CSH2 tandem domain of SHP2 in complex with the bis-phosphorylated pY627-pY659-Gab1 (613-694) peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
ELECTRON CRYSTALLOGRAPHY
Resolution:
3.20 Å
R-Value Free:
0.35
R-Value Work:
0.30
R-Value Observed:
0.30
Space Group:
P 21 21 21
9QCD validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tyrosine-protein phosphatase non-receptor type 11
Gene (Uniprot):PTPN11
Chain IDs:A (auth: B)
Chain Length:223
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q06124 Pfam ID:PF00017 EC:3.1.3.48
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:GRB2-associated-binding protein 1
Gene (Uniprot):GAB1
Chain IDs:B (auth: C)
Chain Length:69
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q13480
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
PTR B TYR modified residue
Ligand Molecules
NA
Primary Citation
Mechanism of SHP2 activation by bis-Tyr-phosphorylated Gab1
Structure ? ? ? (2025)
DOI: 10.1016/j.str.2025.11.018
Primary Citation of related structures
9QCD
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