9QBJ image
Deposition Date 2025-03-03
Release Date 2025-06-11
Last Version Date 2025-06-11
Entry Detail
PDB ID:
9QBJ
Keywords:
BIOSYNTHETIC PROTEIN
Title:
Legobody dimer
Biological Source:
Source Organism:
Vicugna pacos (Taxon ID: 30538)
Mus musculus (Taxon ID: 10090)
Escherichia coli (Taxon ID: 562)
Staphylococcus aureus subsp. aureus N315 (Taxon ID: 158879)
Streptococcus sp. 'group G' (Taxon ID: 1320)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.20 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9QBJ validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nanobody ALFA-H6
Chain IDs:A (auth: C), B (auth: D)
Chain Length:133
Number of Molecules:2
Biological Source:Vicugna pacos
Polymer Type:polypeptide(L)
Molecule:Fab antibody 8D3_2_H-H6
Chain IDs:C (auth: E), E (auth: G)
Chain Length:237
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Fa antibody 8D3_2_L
Chain IDs:D (auth: F), F (auth: H)
Chain Length:219
Number of Molecules:2
Biological Source:Mus musculus
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G
Gene (Uniprot):spa, malE, spg
Chain IDs:G (auth: I)
Chain Length:543
Number of Molecules:1
Biological Source:Escherichia coli, Staphylococcus aureus subsp. aureus N315, Streptococcus sp. 'group G'
UniProt ID:P0AEY0,P02976,P19909 Pfam ID:PF01547, PF02216, PF01378 EC:3.5.4.38
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Maltose/maltodextrin-binding periplasmic protein,Immunoglobulin G-binding protein A,Immunoglobulin G-binding protein G
Gene (Uniprot):spa, malE, spg
Chain IDs:H (auth: J)
Chain Length:544
Number of Molecules:1
Biological Source:Escherichia coli, Staphylococcus aureus subsp. aureus N315, Streptococcus sp. 'group G'
UniProt ID:P0AEY0,P02976,P19909 Pfam ID:PF01547, PF02216, PF01378 EC:3.5.4.38
Ligand Molecules
NA
Primary Citation
Structure of a cryoEM scaffold
To Be Published ? ? ? (?)
Primary Citation of related structures
9QBJ