9Q1N image
Deposition Date 2025-08-14
Release Date 2025-09-03
Last Version Date 2025-10-01
Entry Detail
PDB ID:
9Q1N
Title:
Crystal structure of human TEAD2-Yap binding domain covalently bound to an allosteric regulator
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.13 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Transcriptional enhancer factor TEF-4
Gene (Uniprot):TEAD2
Chain IDs:A (auth: B), B (auth: A)
Chain Length:234
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Small-Molecule Covalent Stabilization and Inhibition of the TEAD·YAP1 Transcription Factor in Cancer Cells.
Acs Chem.Biol. 20 2142 2158 (2025)
PMID: 40864874 DOI: 10.1021/acschembio.5c00283

Abstact

Transcriptional enhanced associate domain transcription factors (TEAD1 to TEAD4) bind to transcriptional coactivator Yes-Associated Protein (YAP1) or its paralog transcriptional coactivator with PDZ-binding motif (TAZ) to regulate Hippo pathway target genes. The Hippo pathway is a conserved signaling pathway that regulates organ size and cell fate by controlling cell proliferation and apoptosis. Here we report small acrylamide molecules that form a covalent bond with a conserved cysteine at the TEAD palmitate pocket. Binding studies showed profound stabilization of TEADs by the small molecules, and cocrystal structures reveal that the compounds mimic the binding mode of palmitate. The small molecules achieved submicromolar binding constants and subhour reaction half-lives for all four TEADs. In mammalian cells, the compounds stabilize the TEAD•YAP1 interaction yet inhibit the TEAD transcription factor activity. Unexpectedly, several compounds degraded TEAD and YAP1 proteins and inhibited cancer cell viability. This work suggests that degradation of TEAD and YAP1 may amplify the antitumor effects of small molecules targeting the TEAD palmitate pocket, with implications for other cancer targets featuring allosteric lipid-binding sites.

Legend

Protein

Chemical

Disease

Primary Citation of related structures