ISDA: 9PZS

Deposition Date 2025-08-11

Release Date 2025-12-17

Last Version Date 2025-12-17

Entry Detail

PDB ID:

9PZS

Keywords:

TRANSPORT PROTEIN

Title:

Native GluN1/GluN2A/GluN2B in complex with 5F11 and 3D2 Fabs (class 1), glycine and glutamate bound state

Biological Source:

Source Organism:

Mus musculus (Taxon ID: 10090)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.20 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Glutamate receptor ionotropic, NMDA 1
Gene (Uniprot):Grin1
Chain IDs:B (auth: A), F (auth: C)
Chain Length:938
Number of Molecules:2
Biological Source:Mus musculus

UniProt ID:P35438 Pfam ID:PF01094, PF10613, PF00060

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Glutamate receptor ionotropic, NMDA 2A
Gene (Uniprot):Grin2a
Chain IDs:E (auth: B)
Chain Length:1464
Number of Molecules:1
Biological Source:Mus musculus

UniProt ID:P35436 Pfam ID:PF01094, PF10613, PF00060, PF10565

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Glutamate receptor ionotropic, NMDA 2B
Gene (Uniprot):Grin2b
Chain IDs:A (auth: D)
Chain Length:1482
Number of Molecules:1
Biological Source:Mus musculus

UniProt ID:Q01097 Pfam ID:PF01094, PF10613, PF00060, PF10565

Polymer Type:polypeptide(L)
Molecule:Heavy chain of GluN1-specific monoclonal Fab fragment, termed 5F11
Chain IDs:C (auth: F), I (auth: H)
Chain Length:277
Number of Molecules:2
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Light chain of GluN1-specific monoclonal Fab fragment, termed 5F11
Chain IDs:D (auth: G), J (auth: I)
Chain Length:244
Number of Molecules:2
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Heavy chain of GluN2A-specific monoclonal Fab fragment, termed 3D2
Chain IDs:G (auth: J)
Chain Length:141
Number of Molecules:1
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:Light chain of GluN2A-specific monoclonal Fab fragment, termed 3D2
Chain IDs:H (auth: K)
Chain Length:131
Number of Molecules:1
Biological Source:Mus musculus

Ligand Molecules

NAG

Primary Citation

Native GluN1/GluN2A/GluN2B in complex with 5F11 and 3D2 Fabs (class 1), glycine and glutamate-bound state

Kim, J, Gouaux, E.Show

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Primary Citation of related structures

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