ISDA: 9PW4

Deposition Date 2025-08-04

Release Date 2025-11-19

Last Version Date 2025-11-19

Entry Detail

PDB ID:

9PW4

Keywords:

VIRAL PROTEIN

Title:

Structure of V30V4 in complex with SARS-CoV-2 spike

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Homo sapiens (Taxon ID: 9606)
Mus musculus (Taxon ID: 10090)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.85 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike protein S1
Gene (Uniprot):S
Chain IDs:A
Chain Length:684
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF16451, PF09408, PF19209

Polymer Type:polypeptide(L)
Molecule:V30V4 FAB HEAVY CHAIN
Chain IDs:D (auth: C)
Chain Length:226
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:V30V4 FAB LIGHT CHAIN
Chain IDs:B (auth: D)
Chain Length:216
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:SP1-77 FAB HEAVY CHAIN
Chain IDs:E
Chain Length:225
Number of Molecules:1
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:SP1-77 FAB LIGHT CHAIN
Chain IDs:C (auth: F)
Chain Length:213
Number of Molecules:1
Biological Source:Mus musculus

Ligand Molecules

Primary Citation

Affinity Maturation and light-Chain-Mediated Paratope Diversification Anticipates Viral Evolution

Dingus, J, Yoo, D.K, Kumar, S, Kibria, G, Wang, Y.J, Allahyari, Z, Chen, J, Saghei, S, Chen, B, Wesemann, D.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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