9PNO image
Deposition Date 2025-07-21
Release Date 2026-02-11
Last Version Date 2026-02-11
Entry Detail
PDB ID:
9PNO
Title:
Crystal structure of the Streptococcus pneumoniae HtrA protease PDZ domain
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Trypsin-like serine protease
Gene (Uniprot):htrA
Chain IDs:A, B
Chain Length:109
Number of Molecules:2
Biological Source:Streptococcus pneumoniae
Ligand Molecules
Primary Citation
Streptococcus pneumoniae HtrA is a dynamic and monomeric virulence factor capable of forming larger oligomeric complexes.
Protein Sci. 35 e70411 e70411 (2026)
PMID: 41457497 DOI: 10.1002/pro.70411

Abstact

High-temperature requirement A (HtrA) proteases are a conserved family of serine proteases central to protein quality control and bacterial virulence. While Gram-negative and human HtrAs are structurally well studied, Gram-positive homologs remain essentially uncharacterized. Here, we present the first integrated structural and mechanistic analysis of a Gram-positive HtrA, from Streptococcus pneumoniae, a virulence factor essential for adhesion and infection in vivo. Proteomic profiling of an htrA knockout and cleavage assays demonstrate that S. pneumoniae HtrA is required for protein quality control, with the PDZ domain mediating substrate recognition. Biochemically, S. pneumoniae HtrA exists exclusively as a monomer in solution, a striking divergence from canonical trimeric HtrAs that we show is shared with other Gram-positive homologs. NMR analyses reveal that the monomer dynamically samples open and closed conformations, while cryo-EM of a catalytic mutant identifies a hexamer stabilized by a unique LoopA-PDZ interaction. Together, these findings define S. pneumoniae HtrA as a dynamic monomer with interdomain coupling between its protease and PDZ domains, establishing Gram-positive HtrAs as a mechanistically divergent subgroup within the HtrA family.

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Primary Citation of related structures
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