9PBF image
Deposition Date 2025-06-26
Release Date 2025-08-06
Last Version Date 2025-10-08
Entry Detail
PDB ID:
9PBF
Keywords:
Title:
21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 10
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.01 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vesicle-fusing ATPase
Gene (Uniprot):NSF
Chain IDs:D (auth: C), E (auth: F), F (auth: A), G (auth: B), H (auth: D), I (auth: E)
Chain Length:747
Number of Molecules:6
Biological Source:Cricetulus griseus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Syntaxin-1A
Gene (Uniprot):Stx1a
Chain IDs:A (auth: G), B (auth: I)
Chain Length:267
Number of Molecules:2
Biological Source:Rattus norvegicus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Synaptosomal-associated protein 25
Gene (Uniprot):Snap25
Chain IDs:J (auth: H)
Chain Length:222
Number of Molecules:1
Biological Source:Rattus norvegicus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Alpha-soluble NSF attachment protein
Gene (Uniprot):Napa
Chain IDs:C (auth: J), K, L
Chain Length:296
Number of Molecules:3
Biological Source:Rattus norvegicus
Primary Citation
Structural remodeling of target-SNARE protein complexes by NSF enables synaptic transmission.
Nat Commun 16 8371 8371 (2025)
PMID: 40993127 DOI: 10.1038/s41467-025-62764-0

Abstact

Synaptic vesicles containing neurotransmitters fuse with the plasma membrane upon the arrival of an action potential at the active zone. Multiple proteins organize trans-SNARE complex assembly and priming, leading to fusion. One target membrane SNARE, syntaxin, forms nanodomains at the active zone, and another, SNAP-25, enters non-fusogenic complexes with it. Here, we reveal mechanistic details of AAA+ protein NSF (N-ethylmaleimide sensitive factor) and SNAP (soluble NSF attachment protein) action before fusion. We show that syntaxin clusters are conserved, that NSF colocalizes with them, and characterize SNARE populations that may exist within or near them using cryo-EM. Supercomplexes of NSF, α-SNAP, and either a syntaxin tetramer or one of two binary complexes of syntaxin-SNAP-25 reveal atomic details of SNARE processing and show how sequential ATP hydrolysis drives disassembly. These results suggest a functional role for syntaxin clusters as reservoirs and a corresponding role for NSF in syntaxin liberation and SNARE protein quality control preceding fusion.

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