9P6P image
Deposition Date 2025-06-19
Release Date 2025-07-02
Last Version Date 2025-07-02
Entry Detail
PDB ID:
9P6P
Keywords:
TRANSFERASE, Viral Protein
Title:
Crystal Structure of the SARS-CoV-2 2'-O-Methyltransferase with (m7GpppA)pUpU (Cap-0) and S-Adenosyl-L-homocysteine (SAH).
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.95 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 32 2 1
9P6P validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:2'-O-methyltransferase
Gene (Uniprot):rep
Chain IDs:A, C
Chain Length:301
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTD1 Pfam ID:PF06460, PF09401 EC:2.7.7.48
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-structural protein 10
Gene (Uniprot):rep
Chain IDs:B, D
Chain Length:142
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTD1 Pfam ID:PF06460, PF09401 EC:2.7.7.48
Polymer Type:polyribonucleotide
Molecule:RNA (5'-D(*(M7G))-R(P*AP*UP*U)-3')
Chain IDs:E, F (auth: G)
Chain Length:4
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2
Ligand Molecules
CL
MGT
SAH
SO4
ZN
Primary Citation
Crystal Structure of the SARS-CoV-2 2'-O-Methyltransferase with (m7GpppA)pUpU (Cap-0) and S-Adenosyl-L-homocysteine (SAH).
To Be Published ? ? ? (?)
Primary Citation of related structures
9P6P