9OSR image
Deposition Date 2025-05-25
Release Date 2025-10-01
Last Version Date 2025-11-26
Entry Detail
PDB ID:
9OSR
Title:
Structure of Fab HB420 in complex with influenza H3N2 A/Moscow/10/1999 neuraminidase
Biological Source:
Source Organism:
Influenza A virus (Taxon ID: 11320)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.16 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Neuraminidase
Gene (Uniprot):NA
Chain IDs:A, B, C, D
Chain Length:388
Number of Molecules:4
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:Variable domain of the heavy chain of Fab hb420
Chain IDs:E (auth: J), F (auth: H), H (auth: K), K (auth: I)
Chain Length:125
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Variable domain of the light chain of Fab HB420
Chain IDs:G (auth: N), I (auth: L), J (auth: R), L (auth: M)
Chain Length:110
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Evolution of antibody cross-reactivity to influenza H5N1 neuraminidase from an N2-specific germline.
Cell Host Microbe 33 1916 ? (2025)
PMID: 41109220 DOI: 10.1016/j.chom.2025.09.015

Abstact

The ongoing spread of highly pathogenic avian influenza H5N1 clade 2.3.4.4b virus in animals and its occasional spillover to humans have raised concerns about a potential H5N1 pandemic. Although recent studies have shown that pre-existing human antibodies can recognize H5N1 neuraminidase, the molecular basis of how this cross-reactivity develops remains poorly understood. In this study, we used a phage display antibody library derived from 245 healthy donors to isolate an antibody, HB420, that cross-reacts with neuraminidases of human H3N2 and avian H5N1 clade 2.3.4.4b viruses and confers protection in vivo. Cryogenic electron microscopy analysis reveals that HB420 targets the neuraminidase active site by mimicking sialic acid binding through a single Asp residue. Furthermore, the inferred germline of HB420 is N2 specific but acquires cross-reactivity to H5N1 neuraminidase through somatic hypermutation. Overall, our findings provide insights into how neuraminidase antibody evolves breadth, which has important implications for the development of broadly protective influenza vaccines.

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Protein

Chemical

Disease

Primary Citation of related structures
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