9OPS image
Deposition Date 2025-05-20
Release Date 2025-07-16
Last Version Date 2025-07-16
Entry Detail
PDB ID:
9OPS
Keywords:
Title:
Structural Insights into Monoterpene Cyclisation of Limonene Synthase from Cannabis sativa
Biological Source:
Source Organism:
Cannabis sativa (Taxon ID: 3483)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:(-)-limonene synthase TPS1, chloroplastic
Gene (Uniprot):TPS1
Chain IDs:A
Chain Length:567
Number of Molecules:1
Biological Source:Cannabis sativa
Primary Citation
Structural insights into monoterpene cyclisation of limonene synthase from Cannabis sativa.
Biochem.Biophys.Res.Commun. 777 152271 152271 (2025)
PMID: 40592253 DOI: 10.1016/j.bbrc.2025.152271

Abstact

Terpenes are the largest and most diverse class of natural products, essential for plant defence, ecological interactions, and environmental adaptation. Cannabis sativa is noted for its rich terpene profile, influencing aroma, flavour, and pharmacological properties. Limonene, a significant monoterpene, is commercially important in the fragrance and flavouring industries, making it a target for metabolic engineering. Terpene biosynthesis involves terpene synthase enzymes that convert isoprenoid diphosphates into diverse terpene scaffolds. Despite advances in terpene biochemistry, C. sativa TPSs lack structural characterisation. This study presents the first crystal structure of (-)-limonene synthase from C. sativa, offering insights into monoterpene biosynthesis. Solved at 3.2 Å resolution, the structure shows an "open" conformation with a solvent-accessible active site and disordered loops near the catalytic pocket, indicating a pre-catalytic state that aids substrate access. Biochemical characterisation confirmed limonene synthase as a highly specific monoterpene synthase, predominantly producing (-)-limonene from geranyl diphosphate with minor amounts of eight other monoterpenes. Kinetic analysis provided a Km of 7.809 ± 0.678 μM and a kcat of 0.0204 s-1, indicating moderate catalytic efficiency compared to other plant monoterpene synthases. These findings improve understanding of TPS function and set the stage for enzyme engineering to optimise terpene biosynthesis for industrial and biotechnological applications.

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