9OL8 image
Deposition Date 2025-05-12
Release Date 2025-12-03
Last Version Date 2025-12-03
Entry Detail
PDB ID:
9OL8
Keywords:
Title:
Backbone-modified parallel beta hairpin (PBH): N-alpha-amino Arginine at position 17
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:(ACE)SKTFIQV(DPR)(4G6) peptide
Chain IDs:A
Chain Length:10
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polypeptide(L)
Molecule:(ACE)KNVLYR(A1CCS) peptide
Chain IDs:B
Chain Length:8
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Impact of Strand Edge N-Amination on the Stability of a Parallel beta-Hairpin Fold.
J.Org.Chem. ? ? ? (2025)
PMID: 41264875 DOI: 10.1021/acs.joc.5c02479

Abstact

Peptide backbone N-amination has emerged as a useful strategy to stabilize antiparallel β-sheet structure. Here, we used circular dichroism and NMR to evaluate the impact of amide-to-hydrazide substitution on the folded population of a parallel β-hairpin model. Outer-edge N-amination was well tolerated and resulted in enhanced stability relative to N-methylation. High-resolution NMR structures confirmed that the α-hydrazino acid residues adopt canonical parallel β-strand torsions that are compatible with the formation of intraresidue C6 hydrogen bonds involving the hydrazide NH2 group.

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Protein

Chemical

Disease

Primary Citation of related structures
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