ISDA

Deposition Date 2025-05-06

Release Date 2025-06-25

Last Version Date 2025-07-02

Entry Detail

PDB ID:

9OJ3

Keywords:

PEPTIDE BINDING PROTEIN

Title:

Crystal structure of the SpyTag003-SpyCatcher003 complex

Biological Source:

Source Organism:

Streptococcus pyogenes (Taxon ID: 1314)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.43 Å

R-Value Free:

0.14

R-Value Work:

0.13

R-Value Observed:

0.13

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fibronectin binding protein
Gene (Uniprot):fba2
Chain IDs:A, C
Chain Length:80
Number of Molecules:2
Biological Source:Streptococcus pyogenes

UniProt ID:Q8G9G1 Pfam ID:PF02986, PF17802

Polymer Type:polypeptide(L)
Molecule:ARG-GLY-VAL-PRO-HIS-ILE-VAL-MET-VAL-ASP-ALA-TYR-LYS-ARG-TYR
Chain IDs:B, D
Chain Length:15
Number of Molecules:2
Biological Source:Streptococcus pyogenes

Ligand Molecules

SO4

TEW

Primary Citation

ALS-ENABLE: creating synergy and opportunity at the Advanced Light Source synchrotron structural biology beamlines.

Ralston, C.Y, Gupta, S, Del Mundo, J.T, Soe, A.C, Russell, B, Rad, B, Tyler, J, Paul, S, Kahan, D.N, Kristensen, L.G, Subramanian, S, Kidd, S, Burnett, K, Sankaran, B, Classen, S, Progozhin, D, Taylor, J.R, Dickert, J.M, Royal, K.B, Rozales, A, Ortega, S.L, Allaire, M, Nix, J.C, Hura, G.L, Holton, J.M, Hammel, M, Adams, P.D.Show

J.Synchrotron Radiat. ? ? ? (2025)

PMID: 40531663 DOI: 10.1107/S1600577525004205

Abstact

ALS-ENABLE is an integrated NIH P30 resource at the Advanced Light Source synchrotron at Lawrence Berkeley National Laboratory in Berkeley, California, USA. The resource provides a single portal to the combined mature structural biology technologies of macromolecular crystallography, small-angle X-ray scattering and X-ray footprinting mass spectrometry, and includes beamlines 2.0.1, 3.3.1, 4.2.2, 5.0.1, 5.0.2, 5.0.3, 8.2.1, 8.2.2, 8.3.1 and 12.3.1. This paper describes the organizational structure and the technologies of ALS-ENABLE. A case study showcasing the main technologies of the resource applied to the characterization of the SpyCatcher-SpyTag protein system is presented.

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Primary Citation of related structures