9O8Y image
Deposition Date 2025-04-17
Release Date 2025-04-30
Last Version Date 2025-04-30
Entry Detail
PDB ID:
9O8Y
Keywords:
TRANSFERASE
Title:
Crystal structure of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) from Bordetella pertussis (succinyl-CoA bound)
Biological Source:
Source Organism:
Bordetella pertussis Tohama I (Taxon ID: 257313)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.45 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.16
Space Group:
P 21 21 21
9O8Y validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
Gene (Uniprot):dapD
Chain IDs:A, B, C
Chain Length:278
Number of Molecules:3
Biological Source:Bordetella pertussis Tohama I
UniProt ID:P0A4U8 Pfam ID:PF14805, PF14602
Ligand Molecules
CL
SCA
Primary Citation
Crystal structure of 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (dapD) from Bordetella pertussis (succinyl-CoA bound)
To be published ? ? ? (?)
Primary Citation of related structures
9O8Y