9O55 image
Deposition Date 2025-04-09
Release Date 2025-07-23
Last Version Date 2025-08-13
Entry Detail
PDB ID:
9O55
Keywords:
Title:
Structure of a synthetic antibody (RM010) in complex with a class I MHC presenting a hapten-peptide conjugate
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.88 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):HLA-A
Chain IDs:A
Chain Length:181
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:GTPase KRas, N-terminally processed
Gene (Uniprot):KRAS
Chain IDs:B (auth: C)
Chain Length:10
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:RM010 Fab heavy chain
Chain IDs:C (auth: H)
Chain Length:116
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:RM010 Fab light chain
Chain IDs:D (auth: L)
Chain Length:109
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Generation of actionable, cancer-specific neoantigens from KRAS(G12C) with adagrasib.
Proc.Natl.Acad.Sci.USA 122 e2509012122 e2509012122 (2025)
PMID: 40737322 DOI: 10.1073/pnas.2509012122

Abstact

Effective immune therapy against cancer ideally should target a cancer-specific antigen, an antigen that is present exclusively in cancer cells. However, there is a paucity of cancer-specific antigens that are endogenously produced. HapImmune™ technology utilizes covalent inhibitors directed to an intracellular cancer driver to create cancer-specific neoantigens in the form of drug-peptide conjugates presented by class I MHC molecules. Our previous study with sotorasib, an FDA-approved covalent inhibitor of KRAS(G12C), demonstrated that drug-treated cells produce such neoantigens and can be killed by T cell engagers directed against the drug-peptide/MHC complex. Thus, this technology can unite targeted and immune therapies. In the present study, we examined whether this approach could generalize to another FDA-approved KRAS(G12C) inhibitor, adagrasib, whose chemical structure and cysteine reactivity differ substantially from sotorasib. We developed antibodies selective to adagrasib-KRAS(G12C) peptides presented by HLA-A*03 and A*11 that also show cross-reactivity to other KRAS(G12C) inhibitors presented in the same manner. Cryoelectron microscopy structures revealed a mode of adagrasib-peptide/HLA recognition distinctly different from that of sotorasib-directed HapImmune antibodies. The antibodies in a bispecific T cell engager format killed adagrasib-resistant lung cancer cells upon adagrasib treatment. These results support the broad applicability of the HapImmune approach for creating actionable cancer-specific neoantigens and offer candidates for therapeutic development.

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Disease

Primary Citation of related structures
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