9O10 image
Deposition Date 2025-04-03
Release Date 2025-05-28
Last Version Date 2025-05-28
Entry Detail
PDB ID:
9O10
Title:
Kv2.1 with voltage sensor in the up conformation under high potassium
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Potassium voltage-gated channel subfamily B member 1
Gene (Uniprot):KCNB1
Chain IDs:A (auth: B), B (auth: A), C, D
Chain Length:858
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Electric field-induced pore constriction in the human K v 2.1 channel.
Proc.Natl.Acad.Sci.USA 122 e2426744122 e2426744122 (2025)
PMID: 40366685 DOI: 10.1073/pnas.2426744122

Abstact

Gating in voltage-dependent ion channels is regulated by the transmembrane voltage. This form of regulation is enabled by voltage-sensing domains (VSDs) that respond to transmembrane voltage differences by changing their conformation and exerting force on the pore to open or close it. Here, we use cryogenic electron microscopy to study the neuronal Kv2.1 channel in lipid vesicles with and without a voltage difference across the membrane. Hyperpolarizing voltage differences displace the positively charged S4 helix in the voltage sensor by one helical turn (~5 Å). When this displacement occurs, the S4 helix changes its contact with the pore at two different interfaces. When these changes are observed in fewer than four voltage sensors, the pore remains open, but when they are observed in all four voltage sensors, the pore constricts. The constriction occurs because the S4 helix, as it displaces inward, squeezes the right-handed helical bundle of pore-lining S6 helices. A similar conformational change occurs upon hyperpolarization of the EAG1 channel but with two helical turns displaced instead of one. Therefore, while Kv2.1 and EAG1 are from distinct architectural classes of voltage-dependent ion channels, called domain-swapped and non-domain-swapped, the way the voltage sensors gate their pores is very similar.

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Primary Citation of related structures