9NW3 image
Deposition Date 2025-03-21
Release Date 2025-07-30
Last Version Date 2025-08-06
Entry Detail
PDB ID:
9NW3
Keywords:
Title:
Ciliary tip central pair
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sperm flagellar protein
Gene (Uniprot):TTHERM_00939230
Chain IDs:AC (auth: 1A), BC (auth: 1B), CC (auth: 1C)
Chain Length:213
Number of Molecules:3
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TLP1
Gene (Uniprot):TTHERM_00070880
Chain IDs:DC (auth: 2A), EC (auth: 2B), FC (auth: 2C)
Chain Length:742
Number of Molecules:3
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:C2 domain protein
Gene (Uniprot):TTHERM_00243990
Chain IDs:GC (auth: 3A), HC (auth: 3B), IC (auth: 3C)
Chain Length:495
Number of Molecules:3
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CFAP213
Gene (Uniprot):TTHERM_00773430
Chain IDs:JC (auth: 4A), KC (auth: 4B), LC (auth: 4C), MC (auth: 4D)
Chain Length:317
Number of Molecules:4
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TLP2
Gene (Uniprot):TTHERM_00370820
Chain IDs:NC (auth: 5A), OC (auth: 5B), PC (auth: 5C)
Chain Length:1754
Number of Molecules:3
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cation channel family protein
Gene (Uniprot):TTHERM_000686039
Chain IDs:QC (auth: 6A), RC (auth: 6B), SC (auth: 6C)
Chain Length:346
Number of Molecules:3
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dpy-30 motif protein
Gene (Uniprot):TTHERM_00158390
Chain IDs:TC (auth: 7A), UC (auth: 7B), VC (auth: 7C), WC (auth: 7D), XC (auth: 7E), YC (auth: 7F)
Chain Length:101
Number of Molecules:6
Biological Source:Tetrahymena thermophila CU428
Polymer Type:polypeptide(L)
Molecule:Unknown
Chain IDs:ZC (auth: 8A), AD (auth: 8B), BD (auth: 8C), CD (auth: 8D), DD (auth: 8E), ED (auth: 8F), FD (auth: 8G), GD (auth: 8H), HD (auth: 8I), ID (auth: 8J), JD (auth: 8K), KD (auth: 8L), LD (auth: 8M), MD (auth: 8N), ND (auth: 8O), OD (auth: 8P), PD (auth: 8Q), QD (auth: 8R), RD (auth: 8S), SD (auth: 8T), TD (auth: 8U), UD (auth: 8V), VD (auth: 8W), WD (auth: 8X), XD (auth: 8Y), YD (auth: 8Z), ZD (auth: 9A)
Chain Length:38
Number of Molecules:27
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha chain
Chain IDs:A (auth: AA), C (auth: AC), E (auth: AE), G (auth: BA), I (auth: BC), K (auth: BE), M (auth: CA), O (auth: CC), Q (auth: CE), S (auth: DA), U (auth: DC), W (auth: DE), Y (auth: EA), AA (auth: EC), CA (auth: EE), EA (auth: FA), GA (auth: FC), IA (auth: FE), KA (auth: GA), MA (auth: GC), OA (auth: GE), QA (auth: HA), SA (auth: HC), UA (auth: HE), WA (auth: IA), YA (auth: IC), AB (auth: IE), CB (auth: JA), EB (auth: JC), GB (auth: JE), IB (auth: KA), KB (auth: KC), MB (auth: KE), OB (auth: LA), QB (auth: LC), SB (auth: LE), UB (auth: MA), WB (auth: MC), YB (auth: ME)
Chain Length:449
Number of Molecules:39
Biological Source:Tetrahymena thermophila CU428
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tubulin beta chain
Gene (Uniprot):BTU1, BTU2
Chain IDs:B (auth: AB), D (auth: AD), F (auth: AF), H (auth: BB), J (auth: BD), L (auth: BF), N (auth: CB), P (auth: CD), R (auth: CF), T (auth: DB), V (auth: DD), X (auth: DF), Z (auth: EB), BA (auth: ED), DA (auth: EF), FA (auth: FB), HA (auth: FD), JA (auth: FF), LA (auth: GB), NA (auth: GD), PA (auth: GF), RA (auth: HB), TA (auth: HD), VA (auth: HF), XA (auth: IB), ZA (auth: ID), BB (auth: IF), DB (auth: JB), FB (auth: JD), HB (auth: JF), JB (auth: KB), LB (auth: KD), NB (auth: KF), PB (auth: LB), RB (auth: LD), TB (auth: LF), VB (auth: MB), XB (auth: MD), ZB (auth: MF)
Chain Length:443
Number of Molecules:39
Biological Source:Tetrahymena thermophila CU428
Primary Citation
Structure of the ciliary tip central pair reveals the unique role of the microtubule-seam binding protein SPEF1.
Curr.Biol. 35 3404 3417.e6 (2025)
PMID: 40651469 DOI: 10.1016/j.cub.2025.06.020

Abstact

Motile cilia are unique organelles with the ability to move autonomously. The force generated by beating cilia propels cells and moves fluids. The ciliary skeleton is made of peripheral doublet microtubules and a central pair (CP) with a distinct structure at the tip. In this study, we present a high-resolution structure of the CP in the ciliary tip of the ciliate Tetrahymena thermophila and identify several tip proteins that bind and form unique patterns on both microtubules of the tip CP. Two of those proteins that contain tubulin polymerization-promoting protein (TPPP)-like domains, TLP1 and TLP2, bind to high curvature regions of the microtubule. TLP2, which contains two TPPP-like domains, is an unusually long protein that wraps laterally around half a microtubule and forms the bridge between the two microtubules. Moreover, we found that the conserved protein SPEF1 binds to both microtubule seams and crosslinked the two microtubules. In vitro, human SPEF1 binds to the microtubule seam as visualized by cryoelectron tomography and subtomogram averaging. Single-molecule microtubule dynamics assays indicate that SPEF1 stabilizes microtubules in vitro. Together, these data show that the proteins in the tip CP maintain stable microtubule structures and play important roles in maintaining the integrity of the axoneme.

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