9NSD image
Deposition Date 2025-03-16
Release Date 2026-01-21
Last Version Date 2026-03-04
Entry Detail
PDB ID:
9NSD
Keywords:
Title:
Crystal structure of PvCSS-PvPTRAMP in complex with nanobody D7
Biological Source:
Source Organism(s):
Plasmodium vivax (Taxon ID: 5855)
Vicugna pacos (Taxon ID: 30538)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.14 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 32
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cysteine-rich small secreted protein CSS, putative
Gene (Uniprot):PVP01_1344100
Mutagens:T182A, S354A
Chain IDs:A, G (auth: B), H (auth: D)
Chain Length:276
Number of Molecules:3
Biological Source:Plasmodium vivax
Polymer Type:polypeptide(L)
Molecule:Nanobody D7
Chain IDs:B (auth: E), C, D (auth: F)
Chain Length:126
Number of Molecules:3
Biological Source:Vicugna pacos
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Thrombospondin-related apical membrane protein
Gene (Uniprot):PVP01_1436800
Mutagens:S117A
Chain IDs:E (auth: G), F (auth: H), I
Chain Length:279
Number of Molecules:3
Biological Source:Plasmodium vivax
Ligand Molecules
Primary Citation
PTRAMP, CSS and Ripr form a conserved complex required for merozoite invasion of Plasmodium species into erythrocytes.
Nat Commun 17 1780 1780 (2026)
PMID: 41587959 DOI: 10.1038/s41467-026-68486-1

Abstact

Invasion of erythrocytes by members of the Plasmodium genus is an essential step of the parasite lifecycle, orchestrated by numerous host-parasite interactions. In P. falciparum Rh5, with PfCyRPA, PfRipr, PfCSS, and PfPTRAMP, forms the essential PCRCR complex which binds basigin on the erythrocyte surface. Rh5 is restricted to P. falciparum and its close relatives; however, PTRAMP, CSS and Ripr orthologs are present across the Plasmodium genus. We investigated PTRAMP, CSS and Ripr orthologs from three species to elucidate common features of the complex. Like P. falciparum, PTRAMP and CSS form a disulfide-linked heterodimer in both P. vivax and P. knowlesi with all three species forming a complex with Ripr by binding its C-terminal region, termed the PTRAMP-CSS-Ripr (PCR) complex. Cross-reactive antibodies targeting the PCR complex differentially inhibit merozoite invasion. The crystal structure of a cross-reactive antibody reveals an inhibitory epitope on the C-terminal tail of PvRipr. Cryo-EM visualization of the P. knowlesi PCR complex confirms predicted models and demonstrates a core invasion scaffold in Plasmodium spp. with implications for vaccines targeting multiple species of malaria-causing parasites.

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Disease

Primary Citation of related structures
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