ISDA

Deposition Date 2025-02-28

Release Date 2025-06-11

Last Version Date 2025-06-11

Entry Detail

PDB ID:

9NKA

Keywords:

DNA

Title:

[-1,8,12-->14] Shifted tensegrity triangle with an (arm,center,arm) distribution of (-1,8,12) base pairs and 2 nt sticky ends containing a semi-junction that becomes left-handed

Biological Source:

Source Organism:

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

4.88 Å

R-Value Free:

0.21

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

H 3

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Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*AP*GP*AP*TP*GP*CP*AP*CP*TP*GP*CP*TP*GP*T)-3')
Chain IDs:A
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*GP*GP*AP*CP*AP*GP*C*AP*GP*TP*GP*CP*AP*T)-3')
Chain IDs:B
Chain Length:15
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*AP*CP*CP*CP*GP*T)-3')
Chain IDs:C
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*TP*GP*TP*GP*A)-3')
Chain IDs:D (auth: F)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Shifted tensegrity triangles

Horvath, A, Vecchioni, S, Woloszyn, K, Ohayon, Y.P, Sha, R.Show

To Be Published ? ? ? (?)

Primary Citation of related structures