9NJK image
Deposition Date 2025-02-27
Release Date 2025-03-19
Last Version Date 2025-10-01
Entry Detail
PDB ID:
9NJK
Title:
The Cryo-EM structure of the yeast Rad51-ssDNA nucleoprotein filament ADP bound state
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.37 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA repair protein RAD51
Gene (Uniprot):RAD51
Chain IDs:A (auth: D), B (auth: C), C (auth: E), D (auth: F), E (auth: B), F (auth: A)
Chain Length:400
Number of Molecules:6
Biological Source:Saccharomyces cerevisiae
Primary Citation
ATP hydrolysis-driven structural transitions within the Saccharomyces cerevisiae Rad51 and Dmc1 nucleoprotein filaments.
J.Biol.Chem. 301 110528 110528 (2025)
PMID: 40721016 DOI: 10.1016/j.jbc.2025.110528

Abstact

Homologous recombination (HR) is essential for the maintenance of genome stability and for generating genetic diversity during meiosis. The eukaryotic protein Rad51 is member of the Rad51/RecA family of DNA recombinases and is responsible for guiding the DNA pairing reactions that take place in HR during mitosis. Dmc1 is a meiosis-specific paralog of Rad51 and is responsible for the DNA pairing reactions that take place in HR during meiosis. Rad51 and Dmc1 are both ATP-dependent DNA-binding proteins and both form extended helical filaments on ssDNA, which are key intermediates in HR. The stability of these nucleoprotein filaments is highly regulated and is also tightly coupled to nucleotide binding and hydrolysis. ATP binding promotes filament assembly, whereas the hydrolysis of ATP to ADP reduces filament stability to promote filament disassembly. Here, we present cryo-EM structures of the Saccharomyces cerevisiae recombinases Rad51 and Dmc1 in the ADP-bound states and provide a detailed structural comparison to the ATP-bound filaments. Our findings yield insights into the structural transitions that take place during the hydrolysis of ATP to ADP and suggest a new model for how these structural changes may be linked to nucleoprotein filament disassembly.

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