ISDA

Deposition Date 2025-02-18

Release Date 2025-06-11

Last Version Date 2025-06-11

Entry Detail

PDB ID:

9NDC

Keywords:

DNA

Title:

[3,14,12-2] Shifted tensegrity triangle with an (arm,center,arm) distribution of (3,14,12) base pairs and 2 nt sticky ends

Biological Source:

Source Organism:

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

6.34 Å

R-Value Free:

0.26

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

H 3

Download Validation Report

Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (31-MER)
Chain IDs:A
Chain Length:31
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*GP*C)-3')
Chain IDs:B
Chain Length:3
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*GP*CP*TP*CP*GP*TP*CP*AP*GP*TP*CP*GP*T)-3')
Chain IDs:C
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*CP*AP*CP*GP*TP*GP*TP*GP*AP*GP*TP*CP*A)-3')
Chain IDs:D (auth: E)
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Shifted tensegrity triangles

Horvath, A, Vecchioni, S, Woloszyn, K, Ohayon, Y.P, Sha, R.Show

To Be Published ? ? ? (?)

Primary Citation of related structures