ISDA

Deposition Date 2025-02-14

Release Date 2025-06-11

Last Version Date 2025-06-11

Entry Detail

PDB ID:

9NBV

Keywords:

DNA

Title:

[5,7,8-1] Shifted tensegrity triangle with an (arm,center,arm) distribution of (5,7,8) base pairs and 1 nt sticky ends

Biological Source:

Source Organism:

synthetic construct (Taxon ID: 32630)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

5.97 Å

R-Value Free:

0.38

R-Value Work:

0.28

R-Value Observed:

0.28

Space Group:

H 3

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Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*AP*GP*CP*AP*CP*CP*TP*GP*TP*A)-3')
Chain IDs:A
Chain Length:10
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*AP*CP*AP*CP*CP*GP*T)-3')
Chain IDs:B
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*TP*CP*TP*GP*AP*CP*TP*GP*TP*GP*GP*TP*GP*C)-3')
Chain IDs:C
Chain Length:14
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*CP*GP*GP*AP*CP*AP*GP*TP*CP*AP*G)-3')
Chain IDs:D
Chain Length:11
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Shifted tensegrity triangles

Horvath, A, Vecchioni, S, Woloszyn, K, Ohayon, Y.P, Sha, R.Show

To Be Published ? ? ? (?)

Primary Citation of related structures