9MQ1 image
Deposition Date 2025-01-01
Release Date 2025-11-05
Last Version Date 2026-01-21
Entry Detail
PDB ID:
9MQ1
Title:
Cryo-EM map of H5 HA (A/Jiangsu/NJ210/2023) in complex with monoclonal fab 20D10
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Influenza A virus (Taxon ID: 11320)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
3.37 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1
Gene (Uniprot):HA
Chain IDs:C (auth: B), E (auth: A), G (auth: C)
Chain Length:220
Number of Molecules:3
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:20D10 Heavy Chain Fab
Chain IDs:A (auth: H)
Chain Length:122
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:20D10 Light Chain Fab
Chain IDs:B (auth: L)
Chain Length:112
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA2
Gene (Uniprot):HA
Chain IDs:D (auth: b), F (auth: a), H (auth: c)
Chain Length:220
Number of Molecules:3
Biological Source:Influenza A virus
Ligand Molecules
Primary Citation
Human monoclonal antibodies that target clade 2.3.4.4b H5N1 hemagglutinin.
Nat Commun 17 135 135 (2025)
PMID: 41390501 DOI: 10.1038/s41467-025-66829-y

Abstact

The highly pathogenic avian influenza H5N1 virus clade 2.3.4.4b has been spreading globally since 2022, causing mortality and morbidity in domestic and wild birds, as well as in mammals, which underscores its potential to cause a pandemic. Here, we generate a panel of anti-hemagglutinin (HA) human monoclonal antibodies (mAbs) against the H5 protein of clade 2.3.4.4b. To develop human chimeric antibodies, H2L2 Harbor Mice®, which express human immunoglobulin germline genes, were immunized with H5 and N1 recombinant proteins from A/mallard/New York/22-008760-007- original/2022 H5N1 virus. Through hybridoma technology, sixteen fully human mAbs are generated, most of which show cross-reactivity against H5 proteins from different clade 2.3.4.4 virus variants. Fourteen out of the sixteen mAbs neutralize the virus in vitro. The mAbs with the strongest hemagglutination inhibition activity also demonstrate greater neutralizing capacity and show increased protective effects in vivo when administered prophylactically or therapeutically in a murine H5N1 challenge model. Using cryo-electron microscopy, we identify a cross-clonotype conserved motif that bound a hydrophobic groove on the head domain of H5 HA. Akin to mAbs against severe acute respiratory syndrome coronavirus 2 during the coronavirus 2019 pandemic, these mAbs could serve as treatments in case of a widespread H5N1 epidemic or pandemic.

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Chemical

Disease

Primary Citation of related structures
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