ISDA

Deposition Date 2024-12-17

Release Date 2025-10-29

Last Version Date 2025-10-29

Entry Detail

PDB ID:

9MKN

Keywords:

VIRAL PROTEIN/IMMUNE SYSTEM

Title:

Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301

Biological Source:

Source Organism:

Respiratory syncytial virus (Taxon ID: 12814)
Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.40 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fusion glycoprotein F2
Gene (Uniprot):F
Chain IDs:A, C, E
Chain Length:70
Number of Molecules:3
Biological Source:Respiratory syncytial virus

UniProt ID:P03420 Pfam ID:PF00523

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Fusion glycoprotein F1
Gene (Uniprot):F
Mutagens:I379V, M447V variant
Chain IDs:B, D, F
Chain Length:370
Number of Molecules:3
Biological Source:Respiratory syncytial virus

UniProt ID:P03420 Pfam ID:PF00523

Polymer Type:polypeptide(L)
Molecule:2245 Fab Heavy Chain
Chain IDs:G (auth: H), H (auth: I), I (auth: J)
Chain Length:226
Number of Molecules:3
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:2245 Fab Light Chain
Chain IDs:J (auth: L), K (auth: M), L (auth: N)
Chain Length:219
Number of Molecules:3
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:3301 Fab Heavy Chain
Chain IDs:M (auth: O), O (auth: Q), Q (auth: S)
Chain Length:231
Number of Molecules:3
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:3301 Fab Light Chain
Chain IDs:N (auth: P), P (auth: R), R (auth: T)
Chain Length:214
Number of Molecules:3
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Generation of antigen-specific paired heavy-light chain antibody sequences using large language models

Wasdin, P.T, Johnson, N.V, Janke, A.K, Held, S, Marinov, T.M, Jordaan, G, Vandenabeele, L, Pantouli, F, Gillespie, R.A, Vukovich, M.J, Holt, C.M, Kim, J.R, Hansman, G, Logue, J, Chu, H.Y, Andrews, S.F, Kanekiyo, M, Sautto, G, Ross, T, Sheward, D.J, McLellan, J.S, Abu-Shmais, A.A, Georgiev, I.S.Show

To Be Published ? ? ? (?)

Primary Citation of related structures