ISDA

Entry Detail

PDB ID:

9MID

Keywords:

IMMUNE SYSTEM

Title:

Crystal structure of the VRC01-class antibody 3G08, derived from GT1.1 vaccination, in complex with eOD-GT8

Biological Source:

Source Organism:

Homo sapiens, Human immunodeficiency virus 1

Host Organism:

Homo sapiens

PDB Version:

Deposition Date:

2024-12-12

Release Date:

2025-05-28

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.74 Å

R-Value Free:

0.24

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

C 1 2 1

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Description:eOD-GT8 engineered mutant of gp120
Chain IDs:C
Chain Length:183
Number of Molecules:1
Biological Source:Human immunodeficiency virus 1

Polymer Type:polypeptide(L)
Description:3G08 Fab Heavy Chain
Chain IDs:A (auth: H)
Chain Length:223
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Description:3G08 Fab Light Chain
Chain IDs:B (auth: L)
Chain Length:211
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

NAG

Primary Citation

Precise targeting of HIV broadly neutralizing antibody precursors in humans

Caniels, T.G, Prabhakaran, M, Ozorowski, G, MacPhee, K.J, Wu, W, van der Straten, K, Agrawal, S, Derking, R, Reiss, E.I.M.M, Millard, K, Turroja, M, Desrosiers, A, Bethony, J, Malkin, E, Liesdek, M.H, van der Veen, A, Klouwens, M, Snitselaar, J.L, Bouhuijs, J.H, Bronson, R, Jean-Baptiste, J, Gajjala, S, Rikhtegaran Tehrani, Z, Benner, A, Ramaswami, M, Duff, M.O, Liu, Y.W, Sato, A.H, Kim, J.Y, Baken, I.J.L, Mendes Silva, C, Bijl, T.P.L, van Rijswijk, J, Burger, J.A, Cupo, A, Yasmeen, A, Phulera, S, Lee, W.H, Randall, K.N, Zhang, S, Corcoran, M.M, Regadas, I, Sullivan, A.C, Brown, D.M, Bohl, J.A, Greene, K.M, Gao, H, Yates, N.L, Sawant, S, Prins, J.M, Kootstra, N.A, Kaminsky, S.M, Barin, B, Rahaman, F, Meller, M, Philiponis, V, Laufer, D.S, Lombardo, A, Mwoga, L, Shotorbani, S, Holman, D, Koup, R.A, Klasse, P.J, Karlsson Hedestam, G.B, Tomaras, G.D, van Gils, M.J, Montefiori, D.C, McDermott, A.B, Hyrien, O, Moore, J.P, Wilson, I.A, Ward, A.B, Diemert, D.J, de Bree, G.J, Andrews, S.F, Caskey, M, Sanders, R.W.Show

Science ? ? ? (2025)

DOI: 10.1126/science.adv5572

Primary Citation of related structures