ISDA

Deposition Date 2024-12-11

Release Date 2025-02-12

Last Version Date 2025-02-12

Entry Detail

PDB ID:

9MHG

Keywords:

SIGNALING PROTEIN

Title:

Cryo EM reconstruction of PI3KC3-C1 in complex with Human RAB1A(Q70L), VPS34 kinase domain in the inactive conformation

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.20 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Phosphoinositide 3-kinase regulatory subunit 4
Gene (Uniprot):PIK3R4
Chain IDs:A
Chain Length:1409
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q99570 Pfam ID:PF00069, PF22956, PF00400

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Phosphatidylinositol 3-kinase catalytic subunit type 3
Gene (Uniprot):PIK3C3
Chain IDs:B
Chain Length:887
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q8NEB9 Pfam ID:PF00792, PF00613, PF00454 EC:2.7.1.137

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beclin 1-associated autophagy-related key regulator
Gene (Uniprot):ATG14
Chain IDs:C
Chain Length:492
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q6ZNE5 Pfam ID:PF10186 EC:2.7.1.137

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beclin-1
Gene (Uniprot):BECN1
Chain IDs:D
Chain Length:450
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q14457 Pfam ID:PF15285, PF17675, PF04111

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Ras-related protein Rab-1A
Gene (Uniprot):RAB1A
Mutations:Q70L
Chain IDs:E
Chain Length:226
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62820 Pfam ID:PF00071 EC:3.6.5.2

Ligand Molecules