9MGA image
Deposition Date 2024-12-10
Release Date 2025-05-07
Last Version Date 2025-07-09
Entry Detail
PDB ID:
9MGA
Keywords:
Title:
Cryo-EM of 3-protofilament helical fibers formed by (NAP)FFGPQYQP
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.85 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:(I7L)FFGPQYQP
Chain IDs:A, B, C
Chain Length:9
Number of Molecules:3
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Intrinsically Disordered Peptide Nanofibers from a Structured Motif Within Proteins.
Angew.Chem.Int.Ed.Engl. 64 e202425456 e202425456 (2025)
PMID: 40294067 DOI: 10.1002/anie.202425456

Abstact

Intrinsically disordered regions (IDRs) are ubiquitous in proteins, orchestrating complex cellular signaling through higher-order protein assemblies. However, the properties and functions of intrinsically disordered peptide (IDP) assemblies are largely underexplored. This work unveiled a facile strategy for engineering IDP assemblies. We demonstrate that conjugating a structured motif derived from a protein's phosphorylation site to a self-assembling tripeptide unexpectedly yields self-assembled nanofibers with intrinsic disorder. Specifically, by using a glycine linker to attach a pentapeptide derived from a phosphorylation site within a random coil region of SRC kinase to the C-terminus of a widely used self-assembling enabler, we generated a phosphorylated octapeptide. The octapeptide exhibits cell compatibility and forms a hydrogel upon dephosphorylation of the phosphooctapeptide. Cryo-electron microscopy (cryo-EM) structural analysis of the nanofibers reveals that the peptides adopt two types of helical arrangements but exhibit intrinsic disorder at the periphery of the nanofibers. The hydrogels exhibit decreased protein adsorption with increasing peptide concentration. This study represents the first instance of a structured random coil within a protein transitioning into an intrinsically disordered state within self-assembled peptide nanofibers, expanding the pool of peptide sequences for IDPs and providing valuable insights for the engineering of peptide nanofibers with intrinsic disorder for the development of cell-compatible biomaterials.

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Primary Citation of related structures