9MFW image
Deposition Date 2024-12-10
Release Date 2025-12-17
Last Version Date 2026-02-04
Entry Detail
PDB ID:
9MFW
Keywords:
Title:
Motor domain with ADP AAA1 and ADP AAA3 from yeast full-length dynein-1 in 0.1 mM ATP condition
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
4.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dynein heavy chain, cytoplasmic
Gene (Uniprot):DYN1
Chain IDs:A
Chain Length:4092
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae
Primary Citation
A nucleotide code governs Lis1's ability to relieve dynein autoinhibition.
Nat.Chem.Biol. ? ? ? (2026)
PMID: 41571912 DOI: 10.1038/s41589-025-02096-8

Abstact

Dynein-1 is a microtubule motor that transports numerous cytoplasmic cargoes. Activation of motility requires it first overcome an autoinhibited state before its assembly with dynactin and a cargo adaptor. Studies suggest that Lis1 may relieve dynein's autoinhibited state, although evidence for this is lacking. We first determined the rules governing dynein-Lis1 binding, revealing that their binding affinity is regulated by the nucleotide-bound states of each of three nucleotide-binding pockets within dynein. We also found that distinct nucleotide 'codes' coordinate their binding stoichiometry by impacting binding affinity at two different sites within the dynein motor domain. Electron microscopy revealed that a 1 dynein:1 Lis1 complex directly promotes an uninhibited conformational state of dynein, whereas a 1:2 complex resembles the autoinhibited state. Cryo-electron microscopy revealed that the structural basis for Lis1 opening dynein relies on interactions with the linker domain. Our work reveals the biochemical basis by which Lis1 relieves dynein autoinhibition.

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Primary Citation of related structures
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