9M73 image
Deposition Date 2025-03-09
Release Date 2025-09-10
Last Version Date 2025-09-10
Entry Detail
PDB ID:
9M73
Title:
Crystal structure of MBP-fused BIL1/BZR1 (21-104) in complex with double-stranded DNA contaning CACATATGTG
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.31 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Maltodextrin-binding protein,Protein BRASSINAZOLE-RESISTANT 1
Gene (Uniprot):malE, BZR1
Chain IDs:A (auth: C), B (auth: D), E (auth: A), F (auth: B)
Chain Length:453
Number of Molecules:4
Biological Source:Arabidopsis thaliana
Polymer Type:polydeoxyribonucleotide
Molecule:E-box(CATATG)-containing DNA
Chain IDs:C (auth: G), D (auth: H), G (auth: E), H (auth: F)
Chain Length:15
Number of Molecules:4
Biological Source:synthetic construct
Ligand Molecules
Peptide-like Molecules
PRD_900001
Primary Citation
Single cis-elements in brassinosteroid-induced upregulated genes are insufficient to recruit both redox states of the BIL1/BZR1 DNA-binding domain.
Febs Lett. ? ? ? (2025)
PMID: 40882013 DOI: 10.1002/1873-3468.70147

Abstact

The plant-specific transcription factor BRZ-INSENSITIVE-LONG 1 (BIL1)/BRASSINAZOLE-RESISTANT 1 (BZR1) regulates the growth of Arabidopsis thaliana via brassinosteroid signaling, acting as both a gene repressor and activator. Its upregulation requires environmental cues mediated by PHYTOCHROME INTERACTING FACTOR 4 (PIF4), with oxidative modifications via H2O2 enhancing their interaction. However, the nature of the tripartite complex of cis-elements, BIL1/BZR1, and PIF4 under redox changes remains unclear. Here, we demonstrate that oxidation of the DNA-binding domain (DBD) of BIL1/BZR1 alters its DNA-binding ability. However, single cis-elements enriched in brassinosteroid-induced genes do not support binding of either redox form, nor does BIL1/BZR1 DBD heterodimerize with PIF4 DBD on these elements. These findings highlight the complexity of brassinosteroid transcriptional regulation beyond DNA-binding specificity and redox modifications.

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Primary Citation of related structures