9LW9 image
Deposition Date 2025-02-13
Release Date 2025-04-16
Last Version Date 2025-04-30
Entry Detail
PDB ID:
9LW9
Keywords:
Title:
Bacteriophage Mycofy1 proximal head-to-tail interface (C6 symmetry)
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.46 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Portal protein
Gene (Uniprot):4
Chain IDs:A, B
Chain Length:466
Number of Molecules:2
Biological Source:Mycolicibacterium phage Mycofy1
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Adaptor protein gp8
Chain IDs:C, D
Chain Length:182
Number of Molecules:2
Biological Source:Mycolicibacterium phage Mycofy1
Ligand Molecules
Primary Citation
Cryo-EM Reveals Structural Diversity in Prolate-headed Mycobacteriophage Mycofy1.
J.Mol.Biol. 437 169126 169126 (2025)
PMID: 40187685 DOI: 10.1016/j.jmb.2025.169126

Abstact

Mycobacteriophages show promise in treating antibiotic-resistant mycobacterial infections. Here, we isolated Mycofy1, a mycobacteriophage, using M. smegmatis as a host. Cryo-EM analysis revealed that Mycofy1 possesses a prolate head and a long non-contractile tail. We determined structures of its head, head-to-tail interface, terminator, and tail tube to resolutions of ∼3.5 Å. Unexpectedly, we identified two distinct types of prolate head structures, exhibiting a 36° relative rotation in the top cap region. Additionally, the head-to-tail interface demonstrated flexibility. Our structures provide high-resolution cryo-EM data of a mycobacteriophage with a prolate head, as well as detailed structural information of the head-to-tail interface and head-proximal tail region in this phage group. These findings advance our understanding of assembly mechanisms in tailed bacteriophages.

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Primary Citation of related structures