9LH7 image
Deposition Date 2025-01-11
Release Date 2025-10-01
Last Version Date 2025-12-03
Entry Detail
PDB ID:
9LH7
Keywords:
Title:
Pore-like heptameric T201A Vibrio cholerae cytolysin mutant
Biological Source:
Source Organism:
Vibrio cholerae (Taxon ID: 666)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.76 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytolysin VCC
Gene (Uniprot):hlyA
Mutagens:T201A
Chain IDs:A, B, C, D, E, F, G (auth: N)
Chain Length:581
Number of Molecules:7
Biological Source:Vibrio cholerae
Ligand Molecules
Primary Citation
Cradle loop regulates beta-barrel pore-formation mechanism of Vibrio cholerae cytolysin.
Structure ? ? ? (2025)
PMID: 41202807 DOI: 10.1016/j.str.2025.10.013

Abstact

Vibrio cholerae cytolysin (VCC) is a β-barrel pore-forming toxin (β-PFT). The membrane insertion of its pore-forming "pre-stem" motif is the most crucial step in the pore-formation mechanism. In the soluble monomeric form, pre-stem remains clamped against the central cytolysin domain by the so-called cradle loop. In the course of oligomeric pore-formation in the target membranes, the cradle loop gets detached from the pre-stem and reorients, thus allowing the pre-stem to extend and insert into the membrane. Here, we show that the specific cradle loop residue(s) play crucial roles in governing the pore-formation mechanism of VCC by establishing decisive interactions with the neighboring structural domains/modules. The alteration of the cradle loop residue, Y194 in particular, compromises the membrane-insertion of the pre-stem, and tends to arrest the membrane-bound toxin in the pre-pore-like oligomeric states. Our study suggests that the native cradle loop architecture, with its intact contacts with the surrounding interaction partners, is essential for VCC pore-formation.

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Primary Citation of related structures
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