9LE8 image
Deposition Date 2025-01-07
Release Date 2025-10-08
Last Version Date 2025-10-08
Entry Detail
PDB ID:
9LE8
Keywords:
PHOTOSYNTHESIS
Title:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C2S2M2-type PSII supercomplex
Biological Source:
Source Organism:
Arabidopsis thaliana (Taxon ID: 3702)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.37 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9LE8 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein 3, chloroplastic
Gene (Uniprot):LHCB3
Chain IDs:B (auth: 0), F (auth: AD)
Chain Length:243
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:Q9S7M0 Pfam ID:PF00504
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):AN1_LOCUS9885, AT9943_LOCUS8470, C24_LOCUS9731
Chain IDs:A (auth: 9), C (auth: AA), E (auth: AC), G (auth: AE)
Chain Length:266
Number of Molecules:4
Biological Source:Arabidopsis thaliana
UniProt ID:A0A654EYS2 Pfam ID:PF00504
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):AT9943_LOCUS1369
Chain IDs:D (auth: AB), H (auth: AF)
Chain Length:212
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:A0A178WK60 Pfam ID:PF00504
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein T
Gene (Uniprot):psbT
Chain IDs:X (auth: AG), SA (auth: AT)
Chain Length:33
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P61839 Pfam ID:PF01405
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein Z
Gene (Uniprot):psbZ
Chain IDs:CA (auth: AI), XA (auth: AV)
Chain Length:62
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56790 Pfam ID:PF01737
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit alpha
Gene (Uniprot):psbE
Chain IDs:M (auth: E), HA (auth: e)
Chain Length:83
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56779 Pfam ID:PF00283, PF00284
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit beta
Gene (Uniprot):psbF
Chain IDs:N (auth: F), IA (auth: f)
Chain Length:39
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P62095 Pfam ID:PF00283
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein I
Gene (Uniprot):psbI
Chain IDs:Q (auth: I), LA (auth: i)
Chain Length:36
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P62100 Pfam ID:PF02532
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II protein D1
Gene (Uniprot):psbA
Chain IDs:I (auth: J), DA (auth: AJ)
Chain Length:352
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P83755 Pfam ID:PF00124
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein K
Gene (Uniprot):psbK
Chain IDs:R (auth: K), MA (auth: k)
Chain Length:37
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56782 Pfam ID:PF02533
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein M
Gene (Uniprot):psbM
Chain IDs:T (auth: M), OA (auth: m)
Chain Length:34
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P62109 Pfam ID:PF05151
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II CP47 reaction center protein
Gene (Uniprot):psbB
Chain IDs:J (auth: O), EA (auth: AK)
Chain Length:508
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56777 Pfam ID:PF00421
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II CP43 reaction center protein
Gene (Uniprot):psbC
Chain IDs:K (auth: P), FA (auth: AL)
Chain Length:459
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56778 Pfam ID:PF00421
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II D2 protein
Gene (Uniprot):psbD
Chain IDs:L (auth: Q), GA (auth: AM)
Chain Length:352
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56761 Pfam ID:PF00124
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II 5 kDa protein, chloroplastic
Gene (Uniprot):PSBT
Chain IDs:Y (auth: U), TA (auth: u)
Chain Length:28
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:Q39195
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein 1, chloroplastic
Gene (Uniprot):LHCB1.3
Chain IDs:O (auth: V), U (auth: p), BA (auth: AH), JA (auth: AN), PA (auth: AQ), WA (auth: AU)
Chain Length:232
Number of Molecules:6
Biological Source:Arabidopsis thaliana
UniProt ID:P04778 Pfam ID:PF00504
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center W protein, chloroplastic
Gene (Uniprot):PSBW
Chain IDs:Z (auth: W), UA (auth: w)
Chain Length:54
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:Q39194 Pfam ID:PF07123
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:(thale cress) hypothetical protein
Gene (Uniprot):AT9943_LOCUS6465
Chain IDs:AA (auth: X), VA (auth: x)
Chain Length:42
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:A0A7G2E9B1 Pfam ID:PF06596
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein H
Gene (Uniprot):psbH
Chain IDs:P (auth: j), KA (auth: AO)
Chain Length:72
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P56780 Pfam ID:PF00737
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein L
Gene (Uniprot):psbL
Chain IDs:S (auth: o), NA (auth: AP)
Chain Length:38
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:P60129 Pfam ID:PF02419
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein CP29.1, chloroplastic
Gene (Uniprot):LHCB4.1
Chain IDs:V (auth: q), QA (auth: AR)
Chain Length:250
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:Q07473 Pfam ID:PF00504
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein CP26, chloroplastic
Gene (Uniprot):LHCB5
Chain IDs:W (auth: v), RA (auth: AS)
Chain Length:232
Number of Molecules:2
Biological Source:Arabidopsis thaliana
UniProt ID:Q9XF89 Pfam ID:PF00504
Ligand Molecules
BCR
BCT
CHL
CLA
DGD
FE2
HEM
LHG
LMG
LUT
NEX
OEX
PHO
PL9
SQD
XAT
Primary Citation
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C2S2M2-type PSII supercomplex
To Be Published ? ? ? (?)
Primary Citation of related structures
9LE8
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