9LBF image
Deposition Date 2025-01-03
Release Date 2025-08-13
Last Version Date 2025-10-22
Entry Detail
PDB ID:
9LBF
Keywords:
Title:
The crystal structure of the truncated PAK2 containing D368N mutant
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.62 Å
R-Value Free:
0.22
R-Value Work:
0.19
Space Group:
H 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Serine/threonine-protein kinase PAK 2
Gene (Uniprot):PAK2
Mutagens:D368N
Chain IDs:A, B
Chain Length:479
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystal structures of PAK2 reveal new insights into its autoinhibitory mechanism.
Structure 33 1663 ? (2025)
PMID: 40752491 DOI: 10.1016/j.str.2025.07.008

Abstact

Type I p21-activated kinases (PAK1/2/3) exist in an auto-inhibited form and are stimulated by small G-protein binding and auto-phosphorylation. Previous structural and biochemical studies suggested that PAK1 is a dimer in crystals, and probably in a trans-inhibited conformation in solution. Here, we used multiple independent biochemical and biophysical methods to determine the oligomeric state and autoinhibitory mechanism of PAK2. Crystal structures of the full-length and N-terminal truncated PAK2 reveal the molecular basis underlying the PAK2 autoinhibition. Analytical ultracentrifugation studies show that these proteins have molecular weights that are consistent with monomeric species. The solution-phase structure of the full-length PAK2 by small angle X-ray scattering and computational modeling further shows a compact but elongated molecular shape. These results, taken together with the results of previous studies, demonstrate that in contrast with the most widely accepted model, all three type I PAKs are monomeric in solution and auto-inhibited in cis before activation.

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Primary Citation of related structures