ISDA: 9L7D

Deposition Date 2024-12-26

Release Date 2025-12-31

Last Version Date 2025-12-31

Entry Detail

PDB ID:

9L7D

Keywords:

ANTIVIRAL PROTEIN

Title:

Type III-B CRISPR-Cas effector from Archaeoglobus fulgidus (Form 2)

Biological Source:

Source Organism(s):

Archaeoglobus fulgidus DSM 4304 (Taxon ID: 224325)
Archaeoglobus fulgidus (Taxon ID: 2234)
Pyrococcus furiosus DSM 3638 (Taxon ID: 186497)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.10 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cmr1 C-terminal domain-containing protein
Gene (Uniprot):AF_1868
Chain IDs:B (auth: A)
Chain Length:329
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus

UniProt ID:O28411 Pfam ID:PF03787, PF22407

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GGDEF domain-containing protein
Gene (Uniprot):AF_1867
Chain IDs:C (auth: B)
Chain Length:1004
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus DSM 4304

UniProt ID:O28412 Pfam ID:PF12469, PF22335

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Type III-B CRISPR module-associated protein Cmr3
Gene (Uniprot):AF_1866
Chain IDs:D (auth: C)
Chain Length:341
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus DSM 4304

UniProt ID:O28413 Pfam ID:PF09700

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Type III-B CRISPR module RAMP protein Cmr4
Gene (Uniprot):AF_1863
Mutagens:D31A
Chain IDs:A (auth: F), G (auth: E)
Chain Length:369
Number of Molecules:2
Biological Source:Archaeoglobus fulgidus DSM 4304

UniProt ID:O28416 Pfam ID:PF03787

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:CRISPR system Cmr subunit Cmr5
Gene (Uniprot):cmr5
Chain IDs:F (auth: G)
Chain Length:155
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus DSM 4304

UniProt ID:O28417 Pfam ID:PF09701

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Type III-B CRISPR module RAMP protein Cmr6
Gene (Uniprot):AF_1861
Chain IDs:E (auth: I)
Chain Length:343
Number of Molecules:1
Biological Source:Archaeoglobus fulgidus DSM 4304

UniProt ID:O28418 Pfam ID:PF03787

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(*UP*GP*UP*AP*GP*UP*AP*UP*GP*CP*GP*GP*UP*CP*CP*UP*UP*GP*CP*GP*GP*C)-3')
Chain IDs:H (auth: V)
Chain Length:45
Number of Molecules:1
Biological Source:Pyrococcus furiosus DSM 3638

Ligand Molecules