9L25 image
Deposition Date 2024-12-16
Release Date 2025-10-22
Last Version Date 2025-10-22
Entry Detail
PDB ID:
9L25
Keywords:
MEMBRANE PROTEIN
Title:
cryo-EM structure of Vitamin K-dependent gamma-carboxylase complexed with factor IX(Gla)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.41 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9L25 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vitamin K-dependent gamma-carboxylase
Gene (Uniprot):GGCX
Chain IDs:A
Chain Length:698
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P38435 Pfam ID:PF05090, PF22777 EC:4.1.1.90
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Coagulation factor IX
Gene (Uniprot):F9
Chain IDs:B
Chain Length:28
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00740 EC:3.4.21.22
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CGU B GLU modified residue
Ligand Molecules
A1AVC
BCT
CLR
CO2
NAG
PEE
Y01
Primary Citation
cryo-EM structure of Vitamin K-dependent gamma-carboxylase complexed with factor IX(Gla)
To Be Published ? ? ? (?)
Primary Citation of related structures
9L25