9KYC image
Deposition Date 2024-12-08
Release Date 2025-10-29
Last Version Date 2025-10-29
Entry Detail
PDB ID:
9KYC
Keywords:
TOXIN
Title:
PltBd1/PltBd2 heteropentameric holotoxin from E. coli
Biological Source:
Source Organism:
Salmonella enterica subsp. diarizonae (Taxon ID: 59204)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.94 Å
Aggregation State:
3D ARRAY
Reconstruction Method:
SINGLE PARTICLE
9KYC validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytolethal distending toxin subunit B family protein
Gene (Uniprot):B4V94_22780, CTQ69_05285, DLB95_17835, G0D72_21670, GB480_00980, GBX62_11500
Chain IDs:A
Chain Length:270
Number of Molecules:1
Biological Source:Salmonella enterica subsp. diarizonae
UniProt ID:A0A3V0PQJ3 Pfam ID:PF03372
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pertussis toxin-like subunit ArtA
Gene (Uniprot):artA
Chain IDs:B
Chain Length:243
Number of Molecules:1
Biological Source:Salmonella enterica subsp. diarizonae
UniProt ID:A0A2I5HFM6 Pfam ID:PF02917
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Subtilase cytotoxin subunit B
Gene (Uniprot):DLB95_17855, G0D47_10640, G2916_21295, G2997_22655, G3A00_19435, GB016_19580, GB034_20695, GB088_22290, GB236_21910, GB246_19595, GB337_19745, GB348_18485, GBS30_22120, GBV97_20140, GBW00_19905, GBX19_22045, GBX62_11520, GBY11_22705, GBY15_15095, GBY49_11215, GBZ10_19965, GBZ12_10545, GBZ37_18525, GBZ41_22400, PG27_18440
Chain IDs:C, F, G
Chain Length:150
Number of Molecules:3
Biological Source:Salmonella enterica subsp. diarizonae
UniProt ID:A0A3Z3F2I6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Subtilase cytotoxin subunit B
Gene (Uniprot):AH359_15415, B4V94_22805, CNQ75_07285, CTQ69_05310, FNI27_02145, G0D47_10645, G2974_22970, GBZ04_18550, JMJ85_10105, PG27_18445
Chain IDs:D, E
Chain Length:116
Number of Molecules:2
Biological Source:Salmonella enterica subsp. diarizonae
UniProt ID:A0A2I5HFM4
Ligand Molecules
NA
Primary Citation
Functional Synergy of Heteropentameric B Subunits Underlies Virulence in a Salmonella A2B5 Toxin
To Be Published ? ? ? (?)
Primary Citation of related structures
9KYC