9KTI image
Entry Detail
PDB ID:
9KTI
EMDB ID:
Title:
CryoEM structure of a 2,3-hydroxycinnamic acid 1,2-dioxygenase MhpB in substrate bound form
Biological Source:
PDB Version:
Deposition Date:
2024-12-02
Release Date:
2025-02-12
Method Details:
Experimental Method:
Resolution:
2.59 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase
Chain IDs:A, B, C, D, E, F, G, H, I, J
Chain Length:314
Number of Molecules:10
Biological Source:Escherichia coli K-12
Primary Citation
Structural and catalytic insights into MhpB: A dioxygenase enzyme for degrading catecholic pollutants.
J Hazard Mater 488 137431 137431 (2025)
PMID: 39892151 DOI: 10.1016/j.jhazmat.2025.137431

Abstact

The increasing environmental pollution from persistent aromatic compounds requires effective biodegradation strategies. In this study, we focused on MhpB, an extradiol dioxygenase (EDO) from Escherichia coli. It is known for its role in the degradation of catechols, key intermediates in the degradation of aromatic compounds. We report the high-resolution structure of MhpB determined by cryo-electron microscopy, revealing a decameric conformation with the catalytic chamber at the side. The structure-based analysis allowed us to investigate the substrate-enzyme interaction and the substrate selectivity, which are crucial for its catalytic function. Site-directed mutagenesis was used to modulate the in vitro and in vivo substrate preference of MhpB, enhancing its potential for industrial applications in pollutant degradation. The study provides insight into the mechanism of the enzyme and paves the way for the development of engineered EDOs for environmental remediation of aromatic pollutants.

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