9KPU image
Entry Detail
PDB ID:
9KPU
Keywords:
Title:
Crystal structure of FrazP2 in complex with forazoline C
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-11-24
Release Date:
2025-05-21
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.27
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Cytochrome P450
Chain IDs:A, B
Chain Length:390
Number of Molecules:2
Biological Source:Actinomadura sp.
Primary Citation
Cytochrome P450 Mediated Cyclohexane Ring Formation in Forazoline Biosynthesis.
Angew.Chem.Int.Ed.Engl. ? e202504925 e202504925 (2025)
PMID: 40329414 DOI: 10.1002/anie.202504925

Abstact

Forazoline A, produced by the marine actinomycete Actinomadura sp. WMMB-499, is a unique PK/NRP hybrid macrolactone with promising antifungal in vivo efficacy through a previously unreported mechanism. Although a PKS/NRPS gene cluster was identified as a candidate for forazoline production, the precise biosynthetic pathway and the functions of the tailoring enzymes remain unclear. In this work, the functions of three cytochrome P450 mono-oxygenases (FrazP1P2P3) were characterized. Notably, FrazP2 was found to mediate cyclohexane ring formation from an 1,3,6-triene precursor during forazoline A biosynthesis, as confirmed by genetic and biochemical analysis. To gain structural and mechanistic insight into the activity of FrazP2, the crystal structure of a FrazP2-substrate complex has been solved at 2.3 Å resolution. The molecular dynamics simulations and DFT calculations revealed an unprecedented enzyme-catalyzed oxidative cyclization reaction by FrazP2. These findings expand our understanding of the catalytic diversity of cytochrome P450s, contributing to the diversification of natural products and enabling the creation of unnatural derivatives with increased antifungal potency.

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