9KMH image
Entry Detail
PDB ID:
9KMH
EMDB ID:
EMD-62433
Keywords:
VIRAL PROTEIN
Title:
The Composite Cryo-EM Structure of the Portal Vertex of Bacteriophage FCWL1
Biological Source:
Source Organism:
Escherichia phage FCWL1
PDB Version:
Deposition Date:
2024-11-16
Release Date:
2025-01-22
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9KMH validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Major capsid protein
Chain IDs:A (auth: aa), F (auth: af), G (auth: ag), H (auth: ah), I (auth: ai), J (auth: aj), M (auth: an), R (auth: as), S (auth: at), T (auth: au), U (auth: av), V (auth: aw), Y (auth: ba), DA (auth: bf), EA (auth: bg), FA (auth: bh), GA (auth: bi), HA (auth: bj), KA (auth: bn), PA (auth: bs), QA (auth: bt), RA (auth: bu), SA (auth: bv), TA (auth: bw), WA (auth: ca), BB (auth: cf), CB (auth: cg), DB (auth: ch), EB (auth: ci), FB (auth: cj)
Chain Length:319
Number of Molecules:30
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MTV7
Protein Blast
Polymer Type:polypeptide(L)
Description:Decoration protein
Chain IDs:B (auth: ab), C (auth: ac), D (auth: ad), E (auth: ae), K (auth: al), L (auth: am), N (auth: ao), O (auth: ap), P (auth: aq), Q (auth: ar), W (auth: ay), X (auth: az), Z (auth: bb), AA (auth: bc), BA (auth: bd), CA (auth: be), IA (auth: bl), JA (auth: bm), LA (auth: bo), MA (auth: bp), NA (auth: bq), OA (auth: br), UA (auth: by), VA (auth: bz), XA (auth: cb), YA (auth: cc), ZA (auth: cd), AB (auth: ce), GB (auth: cl), HB (auth: cm)
Chain Length:158
Number of Molecules:30
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MUC4
Protein Blast
Polymer Type:polypeptide(L)
Description:Decoration protein gp29
Chain IDs:YC (auth: ak), ZC (auth: bk), AD (auth: bx), BD (auth: ck), CD (auth: ax)
Chain Length:255
Number of Molecules:5
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MTZ1
Protein Blast
Polymer Type:polypeptide(L)
Description:Portal protein
Chain IDs:IB (auth: cn), JB (auth: co), KB (auth: cp), LB (auth: cq), TB (auth: cy), EC (auth: dj), PC (auth: du), TC (auth: dy), UC (auth: dz), VC (auth: ea), WC (auth: eb), XC (auth: ec)
Chain Length:444
Number of Molecules:12
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MU40
Protein Blast
Polymer Type:polypeptide(L)
Description:Terminator protein
Chain IDs:MB (auth: cr), NB (auth: cs), OB (auth: ct), PB (auth: cu), QB (auth: cv), RB (auth: cw)
Chain Length:132
Number of Molecules:6
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MU51
Protein Blast
Polymer Type:polypeptide(L)
Description:Adaptor protein
Chain IDs:SB (auth: cx), UB (auth: cz), VB (auth: da), WB (auth: db), XB (auth: dc), YB (auth: dd), ZB (auth: de), AC (auth: df), BC (auth: dg), CC (auth: dh), DC (auth: di), FC (auth: dk)
Chain Length:140
Number of Molecules:12
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MUE8
Protein Blast
Polymer Type:polypeptide(L)
Description:Tail tube protein
Chain IDs:GC (auth: dl), HC (auth: dm), IC (auth: dn), JC (auth: do), KC (auth: dp), LC (auth: dq)
Chain Length:222
Number of Molecules:6
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MUP2
Protein Blast
Polymer Type:polypeptide(L)
Description:Connector protein
Chain IDs:MC (auth: dr), NC (auth: ds), OC (auth: dt), QC (auth: dv), RC (auth: dw), SC (auth: dx)
Chain Length:123
Number of Molecules:6
Biological Source:Escherichia phage FCWL1
UniProt ID:A0AAX4MUS4
Ligand Molecules
NA
Primary Citation
Structures of a T1-like siphophage reveal capsid stabilization mechanisms and high structural similarities with a myophage
To Be Published ? ? ? (?)
Primary Citation of related structures
9KMH