9KMG image
Deposition Date 2024-11-16
Release Date 2025-01-22
Last Version Date 2025-07-02
Entry Detail
PDB ID:
9KMG
Keywords:
Title:
Cryo-EM Structure of Bacteriophage FCWL1 Capsid
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.10 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Major capsid protein
Chain IDs:A, B, C, D, E, F, G
Chain Length:158
Number of Molecules:7
Biological Source:Escherichia phage FCWL1
Polymer Type:polypeptide(L)
Molecule:Decoration protein
Chain IDs:H (auth: a), I (auth: b), J (auth: c), K (auth: d), L (auth: e), M (auth: f), N (auth: g)
Chain Length:158
Number of Molecules:7
Biological Source:Escherichia phage FCWL1
Ligand Molecules
Primary Citation
Structures of a T1-like siphophage reveal capsid stabilization mechanisms and high structural similarities with a myophage.
Structure 33 663 676.e2 (2025)
PMID: 39914381 DOI: 10.1016/j.str.2025.01.012

Abstact

Bacteriophage T1, a member of Siphoviruses, infects Escherichia coli with high efficiency, making it a promising candidate for phage therapy. Here, we report the near-atomic structures of FCWL1, a T1-like phage that belongs to the T1 phage family. We focus on the head, the head-to-tail interface, and its surrounding components. The hexameric capsomer displays unique gaps between neighboring A domains of the major capsid proteins. These gaps are partially filled by the N-loop of the decoration protein, which adopts a unique conformation. These structural features suggest that the phage might employ a novel strategy for stabilizing its head. Furthermore, despite being a siphophage, the head and head-to-tail connector of the phage show high structural similarity to those of a myophage. These findings enhance our understanding of the structure, capsid stabilization mechanism, and evolution of phages in the T1 family.

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Primary Citation of related structures