9KL9 image
Deposition Date 2024-11-14
Release Date 2025-10-01
Last Version Date 2025-10-01
Entry Detail
PDB ID:
9KL9
Keywords:
Title:
crystal structure of a mutant Poly(Ethylene terephthalate) hydrolase
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Poly(Ethylene terephthalate) hydrolase
Gene (Uniprot):HRbin29_00073
Chain IDs:A, B
Chain Length:270
Number of Molecules:2
Biological Source:bacterium HR29
Ligand Molecules
Primary Citation
Computational loop reconstruction based design of efficient PET hydrolases.
Commun Biol 8 934 934 (2025)
PMID: 40527955 DOI: 10.1038/s42003-025-08364-6

Abstact

Enzymatic PET depolymerization represents a promising approach for establishing a circular economy for PET plastics. Nonetheless, limitations in enzyme activity persist as significant challenges to its industrial application. In this research, the backbone structure of the β6-β7 loop for PET hydrolase Bhr-PETase derived from the thermophilic bacterium HR29 was reconstructed by introducing double mutations (H218N/F222M), resulting in variant Bhr-NMT with high thermal stability (Tm = 92.9 °C) and 87% increase in activity. Moreover, the loop reconstruction mutations are transplanted into the engineered PET hydrolases LCC-ICCG and Kubu-PM12, resulting variants LCC-ICCG-NM (Tm = 92.4 °C) and Kubu-PM12-NM (Tm = 92.9 °C). Under high substrate concentration (165 g kg-1) and an enzyme loading of 0.5 mgenzyme gPET-1, the designed variants Bhr-NMT, LCC-ICCG-NM, and Kubu-PM12-NM achieve an overall conversion of 93%, 90%, and 94%, respectively, outperforming the benchmark LCC-ICCG (85%). Notably, under reduced enzyme loading (0.3 mgenzyme gPET-1), Kubu-PM12-NM still reaches an overall conversion of 91%, which is significantly superior to benchmarks Kubu-PM12 (83%) and LCC-ICCG (71%). Overall, the engineered PET hydrolases demonstrate significant potential for industrial PET waste recycling.

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Primary Citation of related structures