9KF9 image
Deposition Date 2024-11-05
Release Date 2025-09-24
Last Version Date 2025-10-08
Entry Detail
PDB ID:
9KF9
Title:
Crystal structure of ferritin mutant(E53H/E56H/E57H/R59H/E60H/E63H)
Biological Source:
Source Organism:
Equus caballus (Taxon ID: 9796)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.22
R-Value Work:
0.20
Space Group:
F 4 3 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ferritin light chain
Gene (Uniprot):FTL
Mutagens:E53H/E56H/E57H/R59H/E60H/E63H
Chain IDs:A
Chain Length:174
Number of Molecules:1
Biological Source:Equus caballus
Primary Citation
An Artificial Metal-Free Peroxidase Designed Using a Ferritin Cage for Bioinspired Catalysis.
Angew.Chem.Int.Ed.Engl. 64 e202504608 e202504608 (2025)
PMID: 40272036 DOI: 10.1002/anie.202504608

Abstact

Developing artificial enzymes is challenging because it requires precise design of active sites with well-arranged amino acid residues. Histidine-rich oligopeptides have been recently shown to exhibit peroxidase-mimetic activities, but their catalytic function relies on maintaining unique supramolecular structures. This work demonstrates the design of a specific array of histidine residues on the internal surface of the ferritin cage to function as an active center for catalysis. The crystal structures of the ferritin mutants revealed histidine-histidine interactions, forming well-defined histidine clusters (His-clusters). These mutants exhibit peroxidase-mimetic activities by oxidizing 3,3',5,5'-tetramethylbenzidine (TMB) in the presence of hydrogen peroxide. Molecular dynamics simulations further highlight the co-localization of TMB and hydrogen peroxide at the histidine-rich clusters, indicating that the confined environment of the ferritin cage enhances their interactions. This study presents a simple yet effective approach to design metal-free artificial enzymes, paving the way for innovations in bioinspired catalysis.

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Primary Citation of related structures