ISDA

Entry Detail

PDB ID:

9K9S

EMDB ID:

EMD-62197

Keywords:

REPLICATION/DNA

Title:

MPXV DNA polymerase in complex with primer/4U template DNA

Biological Source:

Source Organism:

Monkeypox virus

Host Organism:

Spodoptera

PDB Version:

Deposition Date:

2024-10-27

Release Date:

2025-03-05

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.39 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:DNA polymerase
Mutations:D166A and E168A
Chain IDs:A
Chain Length:1031
Number of Molecules:1
Biological Source:Monkeypox virus

UniProt ID:A0A7H0DN44 Pfam ID:PF08452, PF03104, PF08408, PF00136

Protein Blast

Polymer Type:polypeptide(L)
Description:E4R
Chain IDs:B
Chain Length:218
Number of Molecules:1
Biological Source:Monkeypox virus

UniProt ID:M1LL92

Protein Blast

Polymer Type:polypeptide(L)
Description:DNA polymerase processivity factor component A20
Chain IDs:C
Chain Length:426
Number of Molecules:1
Biological Source:Monkeypox virus

UniProt ID:A0A7H0DNC0

Polymer Type:polydeoxyribonucleotide
Description:DNA (25-MER)
Mutations:DC25ddC
Chain IDs:D (auth: P)
Chain Length:25
Number of Molecules:1
Biological Source:Monkeypox virus

Polymer Type:polydeoxyribonucleotide
Description:DNA (4U 38-MER)
Chain IDs:E (auth: T)
Chain Length:38
Number of Molecules:1
Biological Source:Monkeypox virus

Ligand Molecules

TTP

Primary Citation

MPXV DNA polymerase in complex with primer/4U template DNA

Xie, Y.F, Kuai, L, Peng, Q, Wang, Q, Wang, H, Li, X.M, Qi, J.X, Ding, Q, Shi, Y, Gao, F.Show

To Be Published ? ? ? (?)

Primary Citation of related structures